BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012B10LP1|AL426326
(776 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1546 1485 0.0
>3x_Contig1546
Length = 12922
Score = 1485 bits (741), Expect = 0.0
Identities = 761/775 (98%), Gaps = 1/775 (0%)
Strand = Plus / Minus
Query: 3 ttatgttaaggataacggttacatgaaaggaatacttgcattttgggggagaccattcta 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4464 ttatgttaaggataacggttacatgaaaggaatacttgcattttgggggagaccattcta 4405
Query: 63 tgatttttctgagtactatccaacagaaatagaggaagaggaatcgcatgaattaaataa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4404 tgatttttctgagtactatccaacagaaatagaggaagaggaatcgcatgaattaaataa 4345
Query: 123 taaaagatcatcgaaagatcttgaaattaaaatggaggatttgtattgaaacatttgtat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4344 taaaagatcatcgaaagatcttgaaattaaaatggaggatttgtattgaaacatttgtat 4285
Query: 183 ttcacacttgtgtttcacacttgagtgcttaatggactttttgtagattgaratattagt 242
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4284 ttcacacttgtgtttcacacttgagtgcttaatggactttttgtagattgaaatattagt 4225
Query: 243 atactgatcacctcaagtattattatagarattataatacatatrarakggaaacaaaag 302
||||||||||||||||||||||||||||| |||||||||||||| | | |||||||||||
Sbjct: 4224 atactgatcacctcaagtattattatagaaattataatacatataaaatggaaacaaaag 4165
Query: 303 taatggaaaatggcttcctttccgcag-agcccaaaaatagtagtaaaatgcgagaagcg 361
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4164 taatggaaaatggcttcctttccgcaggagcccaaaaatagtagtaaaatgcgagaagcg 4105
Query: 362 agaaatataggtcgtcataaaacactcattaaratgattctttactttgttcatacaagc 421
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4104 agaaatataggtcgtcataaaacactcattaaaatgattctttactttgttcatacaagc 4045
Query: 422 aaataaccaccaaaaatgcaaggractcaagagttggatgggatatccacctttgarata 481
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 4044 aaataaccaccaaaaatgcaaggaactcaagagttggatgggatatccacctttgaaata 3985
Query: 482 gataccttactatcagcaacgtgtctaagctttgatagargggacccgtctgcatgcttg 541
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 3984 gataccttactatcagcaacgtgtctaagctttgatagaagggacccgtctgcatgcttg 3925
Query: 542 ttcaatatatcgtctttcaragatttgttgattaaggraacgccattaatgaataartrt 601
||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| | |
Sbjct: 3924 ttcaatatatcgtctttcaaagatttgttgattaaggaaacgccattaatgaataaatat 3865
Query: 602 gggacatcaggagatttcgaagattctccatagtttgatttataagttgctagcctattc 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3864 gggacatcaggagatttcgaagattctccatagtttgatttataagttgctagcctattc 3805
Query: 662 aactggatatattcttgcatagagtcaccaaattgatgtttgtccaagtcaacaacaata 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3804 aactggatatattcttgcatagagtcaccaaattgatgtttgtccaagtcaacaacaata 3745
Query: 722 atctctggagaaaaagtgtactctaacgtcaaaacattcttcaaatccacagagt 776
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3744 atctctggagaaaaagtgtactctaacgtcaaaacattcttcaaatccacagagt 3690
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5904
Number of Sequences: 1807
Number of extensions: 5904
Number of successful extensions: 143
Number of sequences better than 1.0e-20: 1
length of query: 776
length of database: 10,358,551
effective HSP length: 16
effective length of query: 760
effective length of database: 10,329,639
effective search space: 7850525640
effective search space used: 7850525640
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)